IEEE Signal Process. Background The large volume and suboptimal image quality of portable chest X-rays (CXRs) as a result of the COVID-19 pandemic could post significant challenges for radiologists and frontline physicians. The \(\delta\) symbol refers to the derivative order coefficient. 2 (right). Our method is able to classify pneumonia from COVID-19 and visualize an abnormal area at the same time. Experimental results have shown that the proposed Fuzzy Gabor-CNN algorithm attains highest accuracy, Precision, Recall and F1-score when compared to existing feature extraction and classification techniques. & Cao, J. Hence, it was discovered that the VGG-16 based DTL model classified COVID-19 better than the VGG-19 based DTL model. Syst. medRxiv (2020). The focus of this study is to evaluate and examine a set of deep learning transfer learning techniques applied to chest radiograph images for the classification of COVID-19, normal (healthy), and pneumonia. 35, 1831 (2017). 115, 256269 (2011). Acharya, U. R. et al. CAS They applied the SVM classifier with and without RDFS. In this paper, we propose an improved hybrid classification approach for COVID-19 images by combining the strengths of CNNs (using a powerful architecture called Inception) to extract features and a swarm-based feature selection algorithm (Marine Predators Algorithm) to select the most relevant features. where \(R_L\) has random numbers that follow Lvy distribution. AMERICAN JOURNAL OF EMERGENCY MEDICINE COVID-19: Facemask use prevalence in international airports in Asia, Europe and the Americas, March 2020 They used K-Nearest Neighbor (kNN) to classify x-ray images collected from Montgomery dataset, and it showed good performances. In general, MPA is a meta-heuristic technique that simulates the behavior of the prey and predator in nature37. Besides, the binary classification between two classes of COVID-19 and normal chest X-ray is proposed. Negative COVID-19 images were collected from another Chest X-ray Kaggle published dataset43. Deep learning plays an important role in COVID-19 images diagnosis. Based on54, the later step reduces the memory requirements, and improve the efficiency of the framework. The results are the best achieved on these datasets when compared to a set of recent feature selection algorithms. Apostolopoulos, I. D. & Mpesiana, T. A. Covid-19: automatic detection from x-ray images utilizing transfer learning with convolutional neural networks. Whereas, the worst algorithm was BPSO. While the second dataset, dataset 2 was collected by a team of researchers from Qatar University in Qatar and the University of Dhaka in Bangladesh along with collaborators from Pakistan and Malaysia medical doctors44. where r is the run numbers. Google Scholar. The given Kaggle dataset consists of chest CT scan images of patients suffering from the novel COVID-19, other pulmonary disorders, and those of healthy patients. Figure6 shows a comparison between our FO-MPA approach and other CNN architectures. Inception architecture is described in Fig. PubMed 121, 103792 (2020). A properly trained CNN requires a lot of data and CPU/GPU time. While, MPA, BPSO, SCA, and SGA obtained almost the same accuracy, followed by both bGWO, WOA, and SMA. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 19 (2015). 41, 923 (2019). Adv. 152, 113377 (2020). Mirjalili, S. & Lewis, A. Decis. The results show that, using only 6 epochs for training, the CNNs achieved very high performance on the classification task. \delta U_{i}(t)+ \frac{1}{2! The memory properties of Fc calculus makes it applicable to the fields that required non-locality and memory effect. (3), the importance of each feature is then calculated. Deep-learning artificial intelligent (AI) methods have the potential to help improve diagnostic efficiency and accuracy for reading portable CXRs. Image Anal. The code of the proposed approach is also available via the following link [https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing]. They applied a fuzzy decision tree classifier, and they found that fuzzy PSO improved the classification accuracy. In54, AlexNet pre-trained network was used to extract deep features then applied PCA to select the best features by eliminating highly correlated features. where \(REfi_{i}\) represents the importance of feature i that were calculated from all trees, where \(normfi_{ij}\) is the normalized feature importance for feature i in tree j, also T is the total number of trees. Classification of COVID-19 X-ray images with Keras and its potential problem | by Yiwen Lai | Analytics Vidhya | Medium Write Sign up 500 Apologies, but something went wrong on our end.. the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in In this experiment, the selected features by FO-MPA were classified using KNN. Zhang et al.16 proposed a kernel feature selection method to segment brain tumors from MRI images. where \(ni_{j}\) is the importance of node j, while \(w_{j}\) refers to the weighted number of samples reaches the node j, also \(C_{j}\) determines the impurity value of node j. left(j) and right(j) are the child nodes from the left split and the right split on node j, respectively. The different proposed models will be trained with three-class balanced dataset which consists of 3000 images, 1000 images for each class. Brain tumor segmentation with deep neural networks. Whereas, the slowest and the insufficient convergences were reported by both SGA and WOA in Dataset 1 and by SGA in Dataset 2. \(r_1\) and \(r_2\) are the random index of the prey. Automated detection of covid-19 cases using deep neural networks with x-ray images. IEEE Trans. Generally, the most stable algorithms On dataset 1 are WOA, SCA, HGSO, FO-MPA, and SGA, respectively. We build the first Classification model using VGG16 Transfer leaning framework and second model using Deep Learning Technique Convolutional Neural Network CNN to classify and diagnose the disease and we able to achieve the best accuracy in both the model. Four measures for the proposed method and the compared algorithms are listed. \(Fit_i\) denotes a fitness function value. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate. Furthermore, the proposed GRAY+GRAY_HE+GRAY_CLAHE image representation was evaluated on two different datasets, SARS-CoV-2 CT-Scan and New_Data_CoV2, where it was found to be superior to RGB . arXiv preprint arXiv:1711.05225 (2017). Improving the ranking quality of medical image retrieval using a genetic feature selection method. Sign up for the Nature Briefing newsletter what matters in science, free to your inbox daily. Thank you for visiting nature.com. FCM reinforces the ANFIS classification learning phase based on the features of COVID-19 patients. International Conference on Machine Learning647655 (2014). COVID 19 X-ray image classification. In COVID19 triage, DB-YNet is a promising tool to assist physicians in the early identification of COVID19 infected patients for quick clinical interventions. One of the drawbacks of pre-trained models, such as Inception, is that its architecture required large memory requirements as well as storage capacity (92 M.B), which makes deployment exhausting and a tiresome task. In my thesis project, I developed an image classification model to detect COVID-19 on chest X-ray medical data using deep learning models such . arXiv preprint arXiv:2003.13145 (2020). It can be concluded that FS methods have proven their advantages in different medical imaging applications19. <span> <h5>Background</h5> <p>The COVID19 pandemic has precipitated global apprehensions about increased fatalities and raised concerns about gaps in healthcare . (iii) To implement machine learning classifiers for classification of COVID and non-COVID image classes. A.A.E. Multimedia Tools Appl. Comput. The evaluation confirmed that FPA based FS enhanced classification accuracy. Slider with three articles shown per slide. Appl. In addition, the good results achieved by the FO-MPA against other algorithms can be seen as an advantage of FO-MPA, where a balancing between exploration and exploitation stages and escaping from local optima were achieved. In this paper, we try to integrate deep transfer-learning-based methods, along with a convolutional block attention module (CBAM), to focus on the relevant portion of the feature maps to conduct an image-based classification of human monkeypox disease. 0.9875 and 0.9961 under binary and multi class classifications respectively. On the second dataset, dataset 2 (Fig. 2020-09-21 . A survey on deep learning in medical image analysis. It noted that all produced feature vectors by CNNs used in this paper are at least bigger by more than 300 times compared to that produced by FO-MPA in terms of the size of the featureset. The next process is to compute the performance of each solution using fitness value and determine which one is the best solution. Huang, P. et al. The memory terms of the prey are updated at the end of each iteration based on first in first out concept. The two datasets consist of X-ray COVID-19 images by international Cardiothoracic radiologist, researchers and others published on Kaggle. I. S. of Medical Radiology. The combination of Conv. 2022 May;144:105350. doi: 10.1016/j.compbiomed.2022.105350. Abadi, M. et al. A. The MPA starts with the initialization phase and then passing by other three phases with respect to the rational velocity among the prey and the predator. This task is achieved by FO-MPA which randomly generates a set of solutions, each of them represents a subset of potential features. The results are the best achieved compared to other CNN architectures and all published works in the same datasets. For more analysis of feature selection algorithms based on the number of selected features (S.F) and consuming time, Fig. The test accuracy obtained for the model was 98%. Yousri, D. & Mirjalili, S. Fractional-order cuckoo search algorithm for parameter identification of the fractional-order chaotic, chaotic with noise and hyper-chaotic financial systems. J. where \(fi_{i}\) represents the importance of feature I, while \(ni_{j}\) refers to the importance of node j. (24). The second CNN architecture classifies the X-ray image into three classes, i.e., normal, pneumonia, and COVID-19. 40, 2339 (2020). As a result, the obtained outcomes outperformed previous works in terms of the models general performance measure. This combination should achieve two main targets; high performance and resource consumption, storage capacity which consequently minimize processing time. Sohail, A. S.M., Bhattacharya, P., Mudur, S.P. & Krishnamurthy, S. Classification of ultrasound medical images using distance based feature selection and fuzzy-svm. & Cmert, Z. arXiv preprint arXiv:2003.11597 (2020). Article \(\Gamma (t)\) indicates gamma function. . Detection of lung cancer on chest ct images using minimum redundancy maximum relevance feature selection method with convolutional neural networks. While55 used different CNN structures. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in a credit line to the material. Li, J. et al. (14)(15) to emulate the motion of the first half of the population (prey) and Eqs. Comput. et al. Moreover, from Table4, it can be seen that the proposed FO-MPA provides better results in terms of F-Score, as it has the highest value in datatset1 and datatset2 which are 0.9821 and 0.99079, respectively. Methods: We employed a public dataset acquired from 20 COVID-19 patients, which . For the image features that led to categorization, there were varied levels of agreement in the interobserver and intraobserver components that . Comput. SMA is on the second place, While HGSO, SCA, and HHO came in the third to fifth place, respectively. Corona Virus lung infected X-Ray Images accessible by Kaggle a complete 590 images, which classified in 2 classes: typical and Covid-19. 25, 3340 (2015). (22) can be written as follows: By taking into account the early mentioned relation in Eq. Recombinant: A process in which the genomes of two SARS-CoV-2 variants (that have infected a person at the same time) combine during the viral replication process to form a new variant that is different . For the special case of \(\delta = 1\), the definition of Eq. Hence, the FC memory is applied during updating the prey locating in the second step of the algorithm to enhance the exploitation stage. Taking into consideration the current spread of COVID-19, we believe that these techniques can be applied as a computer-aided tool for diagnosing this virus. To obtain Automatic CNN-based Chest X-Ray (CXR) image classification for detecting Covid-19 attracted so much attention. Biocybern. The name "pangolin" comes from the Malay word pengguling meaning "one who rolls up" from guling or giling "to roll"; it was used for the Sunda pangolin (Manis javanica). Based on Standard Deviation measure (STD), the most stable algorithms were SCA, SGA, BPSO, and bGWO, respectively. https://www.sirm.org/category/senza-categoria/covid-19/ (2020). However, it was clear that VGG19 and MobileNet achieved the best performance over other CNNs. https://doi.org/10.1155/2018/3052852 (2018). For the exploration stage, the weibull distribution has been applied rather than Brownian to bost the performance of the predator in stage 2 and the prey velocity in stage 1 based on the following formula: Where k, and \(\zeta\) are the scale and shape parameters. Vis. For diagnosing COVID-19, the RT-PCR (real-time polymerase chain reaction) is a standard diagnostic test, but, it can be considered as a time-consuming test, more so, it also suffers from false negative diagnosing4. Our results indicate that the VGG16 method outperforms . Computational image analysis techniques play a vital role in disease treatment and diagnosis. Li, S., Chen, H., Wang, M., Heidari, A. Lilang Zheng, Jiaxuan Fang, Xiaorun Tang, Hanzhang Li, Jiaxin Fan, Tianyi Wang, Rui Zhou, Zhaoyan Yan: PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. 11, 243258 (2007). Feature selection using flower pollination optimization to diagnose lung cancer from ct images. In the current work, the values of k, and \(\zeta\) are set to 2, and 2, respectively. Sahlol, A. T., Kollmannsberger, P. & Ewees, A. 6 (left), for dataset 1, it can be seen that our proposed FO-MPA approach outperforms other CNN models like VGGNet, Xception, Inception, Mobilenet, Nasnet, and Resnet. Toaar, M., Ergen, B. Eurosurveillance 18, 20503 (2013). is applied before larger sized kernels are applied to reduce the dimension of the channels, which accordingly, reduces the computation cost. Podlubny, I. a cough chills difficulty breathing tiredness body aches headaches a new loss of taste or smell a sore throat nausea and vomiting diarrhea Not everyone with COVID-19 develops all of these. Future Gener. Nguyen, L.D., Lin, D., Lin, Z. In this subsection, a comparison with relevant works is discussed. Sci. They were also collected frontal and lateral view imagery and metadata such as the time since first symptoms, intensive care unit (ICU) status, survival status, intubation status, or hospital location. Technol. chest X-ray images into three classes of COVID-19, normal chest X-ray and other lung diseases. In addition, up to our knowledge, MPA has not applied to any real applications yet. This dataset consists of 219 COVID-19 positive images and 1341 negative COVID-19 images. Coronavirus Disease (COVID-19): A primer for emergency physicians (2020) Summer Chavez et al. Radiomics: extracting more information from medical images using advanced feature analysis. Anyone you share the following link with will be able to read this content: Sorry, a shareable link is not currently available for this article. Very deep convolutional networks for large-scale image recognition. They achieved 98.08 % and 96.51 % of accuracy and F-Score, respectively compared to our approach with 98.77 % and 98.2% for accuracy and F-Score, respectively. JMIR Formative Research - Classifying COVID-19 Patients From Chest X-ray Images Using Hybrid Machine Learning Techniques: Development and Evaluation Published on 28.2.2023 in Vol 7 (2023) Preprints (earlier versions) of this paper are available at https://preprints.jmir.org/preprint/42324, first published August 31, 2022 . For example, Lambin et al.7 proposed an efficient approach called Radiomics to extract medical image features. Wu, Y.-H. etal. In this paper, we used TPUs for powerful computation, which is more appropriate for CNN. \(\bigotimes\) indicates the process of element-wise multiplications. Nature 503, 535538 (2013). In Smart Intelligent Computing and Applications, 305313 (Springer, 2019). HIGHLIGHTS who: Qinghua Xie and colleagues from the Te Afliated Changsha Central Hospital, Hengyang Medical School, University of South China, Changsha, Hunan, China have published the Article: Automatic Segmentation and Classification for Antinuclear Antibody Images Based on Deep Learning, in the Journal: Computational Intelligence and Neuroscience of 14/08/2022 what: Terefore, the authors . Memory FC prospective concept (left) and weibull distribution (right). Google Scholar. Comparison with other previous works using accuracy measure. A. et al. In Dataset 2, FO-MPA also is reported as the highest classification accuracy with the best and mean measures followed by the BPSO. However, some of the extracted features by CNN might not be sufficient, which may affect negatively the quality of the classification images. Isolation and characterization of a bat sars-like coronavirus that uses the ace2 receptor. Refresh the page, check Medium 's site status, or find something interesting. So, based on this motivation, we apply MPA as a feature selector from deep features that produced from CNN (largely redundant), which, accordingly minimize capacity and resources consumption and can improve the classification of COVID-19 X-ray images. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. Li et al.36 proposed an FS method using a discrete artificial bee colony (ABC) to improve the classification of Parkinsons disease. The Shearlet transform FS method showed better performances compared to several FS methods. MathSciNet The proposed CNN architecture for Task 2 consists of 14 weighted layers, in which there are three convolutional layers and one fully connected layer, as shown in Fig. My education and internships have equipped me with strong technical skills in Python, deep learning models, machine learning classification, text classification, and more. However, it has some limitations that affect its quality. I am passionate about leveraging the power of data to solve real-world problems. Automated detection of alzheimers disease using brain mri imagesa study with various feature extraction techniques. 95, 5167 (2016). 42, 6088 (2017). Fractional-order calculus (FC) gains the interest of many researchers in different fields not only in the modeling sectors but also in developing the optimization algorithms. Expert Syst. M.A.E. The 30-volume set, comprising the LNCS books 12346 until 12375, constitutes the refereed proceedings of the 16th European Conference on Computer Vision, ECCV 2020, which was planned to be held in Glasgow, UK, during August 23-28, 2020. Cancer 48, 441446 (2012). It is calculated between each feature for all classes, as in Eq. Imaging 35, 144157 (2015). Shi, H., Li, H., Zhang, D., Cheng, C. & Cao, X. Lilang Zheng, Jiaxuan Fang, Xiaorun Tang, Hanzhang Li, Jiaxin Fan, Tianyi Wang, Rui Zhou, Zhaoyan Yan. Using the best performing fine-tuned VGG-16 DTL model, tests were carried out on 470 unlabeled image dataset, which was not used in the model training and validation processes. & Wang, W. Medical image segmentation using fruit fly optimization and density peaks clustering. In this paper, filters of size 2, besides a stride of 2 and \(2 \times 2\) as Max pool, were adopted. Acharya et al.11 applied different FS methods to classify Alzheimers disease using MRI images. Moreover, a multi-objective genetic algorithm was applied to search for the optimal features subset. The proposed IFM approach is summarized as follows: Extracting deep features from Inception, where about 51 K features were extracted. Duan, H. et al. One of these datasets has both clinical and image data. Table4 show classification accuracy of FO-MPA compared to other feature selection algorithms, where the best, mean, and STD for classification accuracy were calculated for each one, besides time consumption and the number of selected features (SF). }\delta (1-\delta )(2-\delta )(3-\delta ) U_{i}(t-3) + P.R\bigotimes S_i. Sci. It is also noted that both datasets contain a small number of positive COVID-19 images, and up to our knowledge, there is no other sufficient available published dataset for COVID-19. The variants of concern are Alpha, Beta, Gamma, and than the COVID-19 images. Appl. All data used in this paper is available online in the repository, [https://github.com/ieee8023/covid-chestxray-dataset], [https://stanfordmlgroup.github.io/projects/chexnet], [https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia] and [https://www.sirm.org/en/category/articles/covid-19-database/]. (8) can be remodeled as below: where \(D^1[x(t)]\) represents the difference between the two followed events. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition12511258 (2017). (9) as follows. HIGHLIGHTS who: Yuan Jian and Qin Xiao from the Fukuoka University, Japan have published the Article: Research and Application of Fine-Grained Image Classification Based on Small Collar Dataset, in the Journal: (JOURNAL) what: MC-Loss drills down on the channels to effectively navigate the model, focusing on different distinguishing regions and highlighting diverse features. COVID-19 (coronavirus disease 2019) is a new viral infection disease that is widely spread worldwide. Therefore, a feature selection technique can be applied to perform this task by removing those irrelevant features. The proposed IMF approach is employed to select only relevant and eliminate unnecessary features. Google Research, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, Blog (2017). Also, they require a lot of computational resources (memory & storage) for building & training. In Table4, for Dataset 1, the proposed FO-MPA approach achieved the highest accuracy in the best and mean measures, as it reached 98.7%, and 97.2% of correctly classified samples, respectively. Although the performance of the MPA and bGWO was slightly similar, the performance of SGA and WOA were the worst in both max and min measures. In this paper, a new ML-method proposed to classify the chest x-ray images into two classes, COVID-19 patient or non-COVID-19 person. We can call this Task 2. Generally, the proposed FO-MPA approach showed satisfying performance in both the feature selection ratio and the classification rate. Chollet, F. Keras, a python deep learning library. 97, 849872 (2019). contributed to preparing results and the final figures. Sci Rep 10, 15364 (2020). The proposed approach selected successfully 130 and 86 out of 51 K features extracted by inception from dataset 1 and dataset 2, while improving classification accuracy at the same time. & Mahmoud, N. Feature selection based on hybrid optimization for magnetic resonance imaging brain tumor classification and segmentation. 101, 646667 (2019). Med. Softw. Multimedia Tools Appl. Detecting COVID-19 at an early stage is essential to reduce the mortality risk of the patients. ), such as \(5\times 5\), \(3 \times 3\), \(1 \times 1\). arXiv preprint arXiv:2004.05717 (2020). J. Med. The results indicate that all CNN-based architectures outperform the ViT-based architecture in the binary classification of COVID-19 using CT images. In Inception, there are different sizes scales convolutions (conv. The proposed segmentation method is capable of dealing with the problem of diffuse lung borders in CXR images of patients with COVID-19 severe or critical. An efficient feature generation approach based on deep learning and feature selection techniques for traffic classification. The predator uses the Weibull distribution to improve the exploration capability. The second one is based on Matlab, where the feature selection part (FO-MPA algorithm) was performed. To address this challenge, this paper proposes a two-path semi- supervised deep learning model, ssResNet, based on Residual Neural Network (ResNet) for COVID-19 image classification, where two paths refer to a supervised path and an unsupervised path, respectively. MATH FC provides a clear interpretation of the memory and hereditary features of the process. With the help of numerous algorithms in AI, modern COVID-19 cases can be detected and managed in a classified framework. Using X-ray images we can train a machine learning classifier to detect COVID-19 using Keras and TensorFlow. Also, some image transformations were applied, such as rotation, horizontal flip, and scaling. Scientific Reports (Sci Rep) 2. 2 (left). The data was collected mainly from retrospective cohorts of pediatric patients from Guangzhou Women and Childrens medical center. In 2019 26th National and 4th International Iranian Conference on Biomedical Engineering (ICBME), 194198 (IEEE, 2019). Classification of COVID19 using Chest X-ray Images in Keras 4.6 33 ratings Share Offered By In this Guided Project, you will: Learn to Build and Train the Convolutional Neural Network using Keras with Tensorflow as Backend Learn to Visualize Data in Matplotlib Learn to make use of the Trained Model to Predict on a New Set of Data 2 hours Key Definitions. Compared to59 which is one of the most recent published works on X-ray COVID-19, a combination between You Only Look Once (YOLO) which is basically a real time object detection system and DarkNet as a classifier was proposed. The Weibull Distribution is a heavy-tied distribution which presented as in Fig. Our dataset consisting of 60 chest CT images of COVID-19 and non-COVID-19 patients was pre-processed and segmented using a hybrid watershed and fuzzy c-means algorithm. The dataset consists of 21,165 chest X-ray (CXR) COVID-19 images distributed on four categories which are COVID19, lung opacity, viral pneumonia, and NORMAL (Non-COVID). Initialize solutions for the prey and predator. Donahue, J. et al. The proposed IMF approach successfully achieves two important targets, selecting small feature numbers with high accuracy. Highlights COVID-19 CT classification using chest tomography (CT) images. If the random solution is less than 0.2, it converted to 0 while the random solution becomes 1 when the solutions are greater than 0.2. CNNs are more appropriate for large datasets. Harikumar et al.18 proposed an FS method based on wavelets to classify normality or abnormality of different types of medical images, such as CT, MRI, ultrasound, and mammographic images. Li, H. etal. Figure5, shows that FO-MPA shows an efficient and faster convergence than the other optimization algorithms on both datasets. Furthermore, using few hundreds of images to build then train Inception is considered challenging because deep neural networks need large images numbers to work efficiently and produce efficient features. The accuracy measure is used in the classification phase. COVID-19 Chest X -Ray Image Classification with Neural Network Currently we are suffering from COVID-19, and the situation is very serious. Provided by the Springer Nature SharedIt content-sharing initiative, Environmental Science and Pollution Research (2023), Archives of Computational Methods in Engineering (2023), Arabian Journal for Science and Engineering (2023).
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